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15th International Workshop on Computational Diffusion MRI, CDMRI 2024, held in conjunction with 27th International Conference on Medical Image computing and Computer-Assisted Intervention, MICCAI 2024

作者： Ma, Jiquan Teng, Yujun Chen, Geng Jiang, Haotian Zhang, Kai Liu, Feihong Rekik, Islem Shen, Dinggang School of Computer Science and Technology Heilongjiang University Harbin China National Engineering Laboratory for Integrated Aero-Space-Ground-Ocean Big Data Application Technology School of Computer Science and Engineering Northwestern Polytechnical University Xi’an China School of Biomedical Engineering and State Key Laboratory of Advanced Medical Materials and Devices ShanghaiTech University Shanghai China School of Information Science and Technology Northwest University Xi’an China BASIRA Lab Imperial-X and Department of Computing Imperial College London London United Kingdom

ISBN: (纸本)9783031869198

Diffusion-Weighted Imaging (DWI) is a significant technique for studying white matter. However, it suffers from low-resolution obstacles in clinical settings. Post-acquisition Super-Resolution (SR) can enhance the resolution of DWIs and has gained increasing research interest in recent years. An advanced generative model, the Diffusion Model (DM), exhibits particularly promising performance in image SR. However, effective conditions are required to bootstrap the DM for DWI SR. To this end, we proposed the first DM-based DWI SR model with two effective conditions based on low-solution DWIs and Track Density Imaging (TDI) maps, which possess rich high-resolution prior knowledge Additionally, we consider another condition based on features from low-resolution DWIs. These two conditions are integrated into our model, which comprises three components: DWI Resolution Enhancer (DRE), DWI Feature Extractor (DFE), and TDI Feature Extractor (TFE). DRE combines low-resolution DWI features from DFE with TDI features from TFE to progressively generate high-resolution DWIs. We performed extensive experiments on DWIs of normal subjects from human connectome projects and patients with Parkinson’s disease. The results demonstrate that our model outperforms existing DWI SR models, both qualitatively and quantitatively. © The Author(s), under exclusive license to Springer Nature Switzerland AG 2025.

关键词： Neurodegenerative diseases

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An Encoder-Decoder Model Based On Spiking Neural Networks For Address Event Representation Object Recognition

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IEEE Transactions on Cognitive and Developmental Systems 2025年

作者： Du, Sichun Zhu, Haodi Zhang, Yang Hong, Qinghui Hunan University College of Computer Science and Electronic Engineering Changsha418002 China Shenzhen University Computer Vision Institute School of Computer Science and Software Engineering National Engineering Laboratory for Big Data System Computing Technology Guangdong Key Laboratory of Intelligent Information Processing Shenzhen518060 China

Address event representation (AER) object recognition task has attracted extensive attention in neuromorphic vision processing. The spike-based and event-driven computation inherent in the spiking neural network (SNN) provides an energy-saving solution for AER object recognition. However, SNN with spike timing dependent plasticity (STDP) learning rule has not achieved satisfying AER object recognition performance. This work proposes an SNN-based encoder-decoder model to improve the recognition performance of AER objects. An STDP-based locally connected spiking neural network (LC-SNN) is proposed as an encoder to extract rich spatiotemporal features from AER event flows more flexibly. After the encoder extracts and learns primary features, we propose a fully connected spiking neural network (FC-SNN) based on the reward-modulated spike-timing-dependent plasticity (R-STDP) learning rule as a decoder to learn higher-level features for classification. In addition, we improved the winner-take-all (WTA) mechanisms and R-STDP learning rule in the decoder based on the reward and punish decision, enabling the network to perform better. The experiments are performed on the N-MNIST, MNIST-DVS, and the DVS Gesture datasets, improving the accuracy of the best existing plasticity-based SNN by 0.19%, 0.27% and 1.35%, respectively. © 2016 IEEE.

关键词： Decoding

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Zero-Shot Cross-Domain Code Search without Fine-Tuning

arXiv

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arXiv 2025年

作者： Liang, keyu Liu, Zhongxin Liu, Chao Wan, Zhiyuan Lo, David Yang, Xiaohu The State Key Laboratory of Blockchain and Data Security Zhejiang University Hangzhou China School of Big Data and Software Engineering Chongqing University Chongqing China School of Computing and Information Systems Singapore Management University Singapore Singapore

Code search is a crucial task in software engineering, aiming to retrieve code snippets that are semantically relevant to a natural language query. Recently, Pre-trained Language Models (PLMs) have shown remarkable success and are widely adopted for code search tasks. However, PLM-based methods often struggle in cross-domain scenarios. When applied to a new domain, they typically require extensive fine-tuning with substantial data. Even worse, the data scarcity problem in new domains often forces these methods to operate in a zero-shot setting, resulting in a significant decline in performance. RAPID, which generates synthetic data for model fine-tuning, is currently the only effective method for zero-shot cross-domain code search. Despite its effectiveness, RAPID demands substantial computational resources for fine-tuning and needs to maintain specialized models for each domain, underscoring the need for a zero-shot, fine-tuning-free approach for cross-domain code search. The key to tackling zero-shot cross-domain code search lies in bridging the gaps among domains. In this work, we propose to break the query-code matching process of code search into two simpler tasks: query-comment matching and code-code matching. We first conduct an empirical study to investigate the effectiveness of these two matching schemas in zero-shot cross-domain code search. Our findings highlight the strong complementarity among the three matching schemas, i.e., query-code, query-comment, and code-code matching. Based on the findings, we propose CodeBridge, a zero-shot, fine-tuning-free approach for cross-domain code search. Specifically, CodeBridge first employs zero-shot prompting to guide Large Language Models (LLMs) to generate a comment for each code snippet in the codebase and produce a code for each query. Subsequently, it encodes queries, code snippets, comments, and the generated code using PLMs and assesses similarities through three matching schemas: query-code, query-comment,

关键词： Search engines

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MKD-YOLO: Multi-Scale and Knowledge-Distilling YOLO for Efficient PPE Compliance Detection

MKD-YOLO: Multi-Scale and Knowledge-Distilling YOLO for Effi...

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International Conference on Acoustics, Speech, and Signal Processing (ICASSP)

作者： Juntao Zan Yang Fang Qilie Liu Uswah Khairuddin Yan Li Kaiwei Sun School of Communications and Information Engineering Chongqing University of Posts and Telecommunications Chongqing China Chongqing Key Laboratory of Image Cognition Chongqing University of Posts and Telecommunications Chongqing China Malaysia-Japan International Institute of Technology University of Technology Malaysia Kuala Lumpur Malaysia Department of Electrical and Computer Engineering Inha University Incheon South Korea Key Laboratory of Data Engineering and Visual Computing Chongqing University of Posts and Telecommunications Chongqing China

ISBN: (数字)9798350368741

ISBN: (纸本)9798350368758

YOLO-based models are widely used for personal protective equipment (PPE) compliance detection due to their excellent detection performance and efficiency. However, most YOLO models are not competent for detection tasks in complex industrial scenarios such as remote surveillance and extremely small targets. In addition, there is a lack of effective model lightweighting and knowledge transfer approaches for industrial deployment. To this end, this paper proposes a Multi-scale and Knowledge-Distilling YOLO (MKD-YOLO) based on YOLOv8n for efficient PPE compliance detection. Specifically, in backbone stage, we design an Efficient Multi-Scale Enhanced Convolution (C2f-EMSEC) module and Large Spatial Pyramid Pooling-Fast (LSPPF) module for multi-scale and global-contextual feature learning as well as reducing model complexity. Then, in neck stage, a refined Bidirectional feature Pyramid Network (BPNet) is designated to capture fine-grained details for extremely small object detection. Moreover, we apply channel-wise knowledge distillation to facilitate model lightweighting and domain-specific knowledge transfer learning. Experiments on our proposed dataset and public datasets show that the proposed MKD-YOLO achieves a new state-of-the-art (SOTA) detection performance and efficiency for practical PPE compliance detection tasks. Codes and the dataset are available at https://***/z1Zjt/MKD-YOLO.

关键词： Personal protective equipment YOLO Representation learning Convolution Surveillance Speech enhancement Feature extraction Neck Kernel Knowledge transfer

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Towards Event Extraction with Massive Types: LLM-based Collaborative Annotation and Partitioning Extraction

arXiv

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arXiv 2025年

作者： Liu, Wenxuan Li, Zixuan Bai, Long Zuo, Yuxin Xu, Daozhu Jin, Xiaolong Guo, Jiafeng Cheng, Xueqi School of Computer Science and Technology University of Chinese Academy of Sciences China Key Laboratory of Network Data Science and Technology Institute of Computing Technology Chinese Academy of Sciences China State Key Laboratory of Geo-Information Engineering Shaanxi Xi’an China

Developing a general-purpose extraction system that can extract events with massive types is a long-standing target in Event Extraction (EE). In doing so, the challenge comes from two aspects: 1) The absence of an efficient and effective annotation method. 2) The absence of a powerful extraction method can handle massive types. For the first challenge, we propose a collaborative annotation method based on Large Language Models (LLMs). Through collaboration among multiple LLMs, it first refines annotations of trigger words from distant supervision and then carries out argument annotation. Next, a voting phase consolidates the annotation preferences across different LLMs. Finally, we create the EEMT dataset, the largest EE dataset to date, featuring over 200,000 samples, 3,465 event types, and 6,297 role types. For the second challenge, we propose an LLM-based Partitioning EE method called LLM-PEE. To overcome the limited context length of LLMs, LLM-PEE first recalls candidate event types and then splits them into multiple partitions for LLMs to extract events. The results in the supervised setting show that LLM-PEE outperforms the state-of-the-art methods by 5.4% in event detection and 6.1% in argument extraction. In the zero-shot setting, LLM-PEE achieves up to 12.9% improvement compared to mainstream LLMs, demonstrating its strong generalization capabilities. Copyright © 2025, The Authors. All rights reserved.

关键词： Large datasets

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AMHF-TP:Multifunctional therapeutic peptides prediction based on multi-granularity hierarchical features

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Quantitative Biology 2025年第1期13卷 127-141页

作者： Shouheng Tuo YanLing Zhu Jiangkun Lin Jiewei Jiang School of Computer Science and Technology Xi’an University of Posts and TelecommunicationsXi’anChina Shaanxi Key Laboratory of Network Data Analysis and Intelligent Processing Xi’anChina Xi’an Key Laboratory of Big Data and Intelligent Computing Xi’anChina School of Electronic Engineering Xi’an University of Posts and TelecommunicationsXi’anChina

Multifunctional therapeutic peptides(MFTP)hold immense potential in diverse therapeutic contexts,yet their prediction and identification remain challenging due to the limitations of traditional methodologies,such as extensive training durations,limited sample sizes,and inadequate generalization *** address these issues,we present AMHF-TP,an advanced method for MFTP recognition that utilizes attention mechanisms and multi-granularity hierarchical features to enhance *** AMHF-TP is composed of four key components:a migration learning module that leverages pretrained models to extract atomic compositional features of MFTP sequences;a convolutional neural network and selfattention module that refine feature extraction from amino acid sequences and their secondary structures;a hypergraph module that constructs a hypergraph for complex similarity representation between MFTP sequences;and a hierarchical feature extraction module that integrates multimodal peptide sequence *** with leading methods,the proposed AMHF-TP demonstrates superior precision,accuracy,and coverage,underscoring its effectiveness and robustness in MFTP *** comparative analysis of separate hierarchical models and the combined model,as well as with five contemporary models,reveals AMHFTP’s exceptional performance and stability in recognition tasks.

关键词： deep learning hypergraph multifunctional therapeutic peptides multi-granularity hierarchical features

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Learning to Learn Transferable Generative Attack for Person Re-Identification

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IEEE Transactions on Image Processing 2025年 PP卷 PP页

作者： Bian, Yuan Liu, Min Wang, Xueping Ma, Yunfeng Wang, Yaonan Hunan University National Engineering Research Center of Robot Visual Perception and Control Technology College of Electrical and Information Engineering Hunan Changsha China Hunan Normal University Hunan Provincial Key Laboratory of Intelligent Computing and Language Information Processing College of Information Science and Engineering Hunan Changsha China

Deep learning-based person re-identification (reid) models are widely employed in surveillance systems and inevitably inherit the vulnerability of deep networks to adversarial attacks. Existing attacks merely consider cross-dataset and cross-model transferability, ignoring the cross-test capability to perturb models trained in different domains. To powerfully examine the robustness of real-world re-id models, the Meta Transferable Generative Attack (MTGA) method is proposed, which adopts meta-learning optimization to promote the generative attacker producing highly transferable adversarial examples by learning comprehensively simulated transfer-based crossmodel&dataset&test black-box meta attack tasks. Specifically, cross-model&dataset black-box attack tasks are first mimicked by selecting different re-id models and datasets for meta-train and meta-test attack processes. As different models may focus on different feature regions, the Perturbation Random Erasing module is further devised to prevent the attacker from learning to only corrupt model-specific features. To boost the attacker learning to possess cross-test transferability, the Normalization Mix strategy is introduced to imitate diverse feature embedding spaces by mixing multi-domain statistics of target models. Extensive experiments show the superiority of MTGA, especially in cross-model&dataset and cross-model&dataset&test attacks, our MTGA outperforms the SOTA methods by 20.0% and 11.3% on mean mAP drop rate, respectively. © 1992-2012 IEEE.

关键词： Generative adversarial networks

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arXiv

引用

arXiv 2025年

作者： Li, Yangning Kang, Hui Li, Jiahui Sun, Geng Sun, Zemin Wang, Jiacheng Zhao, Changyuan Niyato, Dusit College of Computer Science and Technology Key Laboratory of Symbolic Computation and Knowledge Engineering of Ministry of Education Jilin University Changchun130012 China College of Computer Science and Technology Jilin University Key Laboratory of Symbolic Computation and Knowledge Engineering of Ministry of Education Jilin University Changchun130012 China College of Computing and Data Science Nanyang Technological University 639798 Singapore College of Computing and Data Science Nanyang Technological University Singapore

An expansion of Internet of Things (IoTs) has led to significant challenges in wireless data harvesting, dissemination, and energy management due to the massive volumes of data generated by IoT devices. These challenges are exacerbated by data redundancy arising from spatial and temporal correlations. To address these issues, this paper proposes a novel data-driven collaborative beamforming (CB)-based communication framework for IoT networks. Specifically, the framework integrates CB with an overlap-based multi-hop routing protocol (OMRP) to enhance data transmission efficiency while mitigating energy consumption and addressing hot spot issues in remotely deployed IoT networks. Based on the data aggregation to a specific node by OMRP, we formulate a node selection problem for the CB stage, with the objective of optimizing uplink transmission energy consumption. Given the complexity of the problem, we introduce a softmax-based proximal policy optimization with long-short-term memory (SoftPPO-LSTM) algorithm to intelligently select CB nodes for improving transmission efficiency. Simulation results show that the proposed OMRP improves network lifetime by 17% compared to benchmark routing protocols, while the SoftPPO-LSTM method for CB node selection achieves an 8.3% increase in throughput over benchmark algorithms. The results also reveal that the combined OMRP with the SoftPPO- Copyright © 2025, The Authors. All rights reserved.

关键词： Deep reinforcement learning

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Any-Angle Routing Algorithm for Microfluidic Biochips Driven by Flow Path

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Jisuanji Yanjiu yu Fazhan/Computer Research and Development 2025年第4期62卷 978-988页

作者： Youlin, Pan Shuai, Guo Xing, Huang Genggeng, Liu College of Computer and Data Science Fuzhou University Fuzhou350116 China Engineering Research Center of Big Data Intelligence Fuzhou University Ministry of Education Fuzhou350116 China Fujian Key Laboratory of Network Computing and Intelligent Information Processing Fuzhou University Fuzhou350116 China School of Computer Science Northwestern Polytechnical University Xi’an710072 China

Continuous-flow microfluidic biochips (CFMBs) have become a hot research topic in recent years due to their ability to perform biochemical assays automatically and efficiently. For the first time, PathDriver+ takes the requirements of the actual fluid transportation into account in the design process of CFMBs and implements the actual fluid transport and removal, and plans separate flow paths for each transport task, which have been neglected in previous work. However, PathDriver+ does not take full advantage of the flexibility of CFMBs routing because it only considers the optimization of flow channel length for the global routing in the mesh model, except for the detailed routing. In addition, PathDriver+ only considers the X architecture, while the existing work shows that the any-angle routing can utilize the routing resources more efficiently and shorten the flow channel length. To address the above issues, we propose a flow path-driven arbitrary angle routing algorithm, which can improve the utilization of routing resources and reduce the flow channel length while considering the actual fluid transportation requirements. The proposed algorithm constructs a search graph based on constrained Delaunay triangulation to improve the search efficiency of routing solutions while ensuring the routing quality. Then, a Dijkstra-based flow path routing method is used on the constructed search graph to generate a routing result with a short channel length quickly. In addition, in the routing process, channel reuse strategy and intersection optimization strategy are proposed for the flow path reuse and intersection number optimization problems, respectively, to further improve the quality of routing results. The experimental results show that compared with the latest work PathDriver+, the length of channels, the number of ports used, and the number of channel intersections are significantly reduced by 33.21%, 11.04%, and 44.79%, respectively, and the channel reuse rate is i

关键词： High level synthesis

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Control Logic Routing for Continuous-Flow Microfluidic Biochips Based on Deep Reinforcement Learning

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Jisuanji Yanjiu yu Fazhan/Computer Research and Development 2025年第4期62卷 950-962页

作者： Cai, Huayang Huang, Xing Liu, Genggeng College of Computer and Data Science Fuzhou University Fuzhou350116 China Engineering Research Center of Big Data Intelligence Fuzhou University Ministry of Education Fuzhou350116 China Fujian Key Laboratory of Network Computing and Intelligent Information Processing Fuzhou University Fuzhou350116 China School of Computer Science Northwestern Polytechnical University Xi’an710072 China

With the advancement of electronic design automation, continuous-flow microfluidic biochips have become one of the most promising platforms for biochemical experiments. This chip manipulates fluid samples in milliliters or nanoliters by utilizing internal microvalves and microchannels, and thus automatically performs basic biochemical experiments, such as mixing and detection. To achieve the correct bioassay function, the microvalves deployed inside the chip are usually managed by a multiplexer-based control logic, and valves receive control signals from a core input through the control channel for accurate switching. Since biochemical reactions typically require high sensitivity, the length of control paths connecting each valve needs to be reduced to ensure immediate signal propagation, and thus to reduce the signal propagation delay. In addition, to reduce the fabrication cost of chips, a vital issue to be addressed in the logic architecture design is how to effectively reduce the total channel length within the control logic. To address the above issues, we propose a deep reinforcement learning-based control logic routing algorithm to minimize the signal propagation delay and total control channel length, thereby automatically constructing an efficient control channel network. The algorithm employs the dueling deep Q-network architecture as the agent of the deep reinforcement learning framework to evaluate the tradeoff between signal propagation delay and total channel length. Besides, the diagonal channel routing is implemented for the first time for control logic, thus fundamentally improving the efficiency of valve switching operations and reducing the fabrication cost of the chip. The experimental results demonstrate that the proposed algorithm can effectively construct a high-performance and low-cost control logic architecture. © 2025 Science Press. All rights reserved.

关键词： Deep reinforcement learning

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