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7th International Conference on Biological Information and Biomedical Engineering, BIBE 2024

作者： Xu, Haoze Yu, Bowen Yu, Chaonan Xu, Kedi Qiushi Academy for Advanced Studies Zhejiang Provincial Key Laboratory of Cardio-Cerebral Vascular Detection Technology and Medicinal Effectiveness Appraisal Key Laboratory for Biomedical Engineering of Ministry of Education School of Biomedical Engineering and Instrument Science Zhejiang University China Nanhu Brain-computer interface institute Hangzhou311100 China State Key Lab of Brain-Machine Intelligence Zhejiang University Hangzhou China

ISBN: (纸本)9783800762910

Respiratory signals are crucial for decoding olfactory neural circuits and understanding respiration-entrained local field potential (LFP) rhythms. Acquiring high-precision respiratory signals often requires additional equipment, increasing the experimental burden, particularly in free-moving paradigms. However, within the current neuroscience paradigm, we have not yet found a non-invasive method for obtaining the respiratory signals of laboratory animals. To minimize surgical trauma to experimental animals, this paper introduces a ConvLSTM-based decoding method, which uses the LFP from the olfactory bulb (OB) region of animals to accurately decode respiratory signals. After validating the effectiveness of the ConvLSTM method through comparative experiments, we further investigated the factors influencing the model's decoding performance. The Gamma frequency band exhibited the best decoding results, with a mean absolute error (MAE) of 0.16±0.09, which may be related to the causal direction from respiratory signals to Gamma rhythms. Additionally, the ConvLSTM model demonstrated strong trend prediction capabilities in multi-sequence point predictions and forward predictions, despite a slight decline in single-point prediction accuracy. Extensive validation on publicly available datasets indicates that the ConvLSTM-based respiratory decoding approach is highly applicable, offering a non-invasive alternative for respiratory signal acquisition in animal studies. © VDE VERLAG GMBH.

关键词： Noninvasive medical procedures

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AsyFOD: An Asymmetric Adaptation Paradigm for Few-Shot Domain Adaptive Object Detection

AsyFOD: An Asymmetric Adaptation Paradigm for Few-Shot Domai...

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Conference on Computer Vision and Pattern Recognition (CVPR)

作者： Yipeng Gao Kun-Yu Lin Junkai Yan Yaowei Wang Wei-Shi Zheng School of Computer Science and Engineering Sun Yat-sen University China Key Laboratory of Machine Intelligence and Advanced Computing Ministry of Education China Pengcheng Lab

In this work, we study few-shot domain adaptive object detection (FSDAOD), where only a few target labeled images are available for training in addition to sufficient source labeled images. Critically, in FSDAOD, the data scarcity in the target domain leads to an extreme data imbalance between the source and target domains, which potentially causes over-adaptation in traditional feature alignment. To address the data imbalance problem, we propose an asymmetric adaptation paradigm, namely AsyFOD, which leverages the source and target instances from different perspectives. Specifically, by using target distribution estimation, the AsyFOD first identifies the target-similar source instances, which serves to augment the limited target instances. Then, we conduct asynchronous alignment between target-dissimilar source instances and augmented target instances, which is simple yet effective for alleviating the over-adaptation. Extensive experiments demonstrate that the proposed AsyFOD outperforms all state-of-the-art methods on four FSDAOD benchmarks with various environmental variances, e.g., 3.1% mAP improvement on Cityscapes-to-FoggyCityscapes and 2.9% mAP increase on Sim10k-to-Cityscapes. The code is available at https://***/Hlings/AsyFPD.

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Shape-Erased Feature Learning for Visible-Infrared Person Re-Identification

arXiv

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arXiv 2023年

作者： Feng, Jiawei Wu, Ancong Zheng, Wei-Shi School of Computer Science and Engineering Sun Yat-sen University China Key Laboratory of Machine Intelligence and Advanced Computing Ministry of Education China Guangdong Key Laboratory of Information Security Technology China

Due to the modality gap between visible and infrared images with high visual ambiguity, learning diverse modality-shared semantic concepts for visible-infrared person re-identification (VI-ReID) remains a challenging problem. Body shape is one of the significant modality-shared cues for VI-ReID. To dig more diverse modality-shared cues, we expect that erasing body-shape-related semantic concepts in the learned features can force the ReID model to extract more and other modality-shared features for identification. To this end, we propose shape-erased feature learning paradigm that decorrelates modality-shared features in two orthogonal subspaces. Jointly learning shape-related feature in one subspace and shape-erased features in the orthogonal complement achieves a conditional mutual information maximization between shape-erased feature and identity discarding body shape information, thus enhancing the diversity of the learned representation explicitly. Extensive experiments on SYSU-MM01, RegDB, and HITSZ-VCM datasets demonstrate the effectiveness of our method.1 Copyright © 2023, The Authors. All rights reserved.

关键词： Semantics

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Point cloud segmentation network based on multi-scale feature fusion

Point cloud segmentation network based on multi-scale featur...

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2024 China Automation Congress, CAC 2024

作者： Deng, Hao Cheng, Peng Cheng, Shengmei Liu, Cheng Du, Shaoyi Wang, Lin State-Province Joint Engineering and Research Center of Advanced Networking and Intelligent Information Service School of Information Science and Technology Northwest University Xi’an China National Key Laboratory of Human-Machine Hybrid Augmented Intelligence National Engineering Research Center for Visual Information and Applications Institute of Artificial Intelligence and Robotics Xi’an Jiaotong University Xi’an China

ISBN: (纸本)9798350368604

Aiming at improving the local feature extraction for point cloud learning, we introduce a point cloud segmentation network that enhances the PointNet++ framework with a local feature transformation module and a multi-scale feature fusion module. The local feature transformation module employs operations akin to convolution to restructure the point cloud's local feature dimensions, thus boosting the network's ability to extract detailed local features. Additionally, the multi-scale feature fusion module integrates semantic features of point clouds across various scales using a layered network design, aiming to heighten segmentation precision. Experimental results indicate that the proposed network can achieve a robust point cloud segmentation accuracy, reaching an accuracy rate of 85.8%. © 2024 IEEE.

关键词： Cloud platforms

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Shape-Erased Feature Learning for Visible-Infrared Person Re-Identification

Shape-Erased Feature Learning for Visible-Infrared Person Re...

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Conference on Computer Vision and Pattern Recognition (CVPR)

作者： Jiawei Feng Ancong Wu Wei-Shi Zheng School of Computer Science and Engineering Sun Yat-sen University China Key Laboratory of Machine Intelligence and Advanced Computing Ministry of Education China Guangdong Key Laboratory of Information Security Technology China

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Augmenting Short Enrollment Speech via Synthesis for Target Speaker Extraction

Augmenting Short Enrollment Speech via Synthesis for Target ...

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2025 IEEE International Conference on Acoustics, Speech, and Signal Processing, ICASSP 2025

作者： Huang, Zikang Lin, Jingru Ge, Meng Jiang, Yu Wang, Xiaobao Wang, Longbiao Dang, Jianwu Tianjin Key Laboratory of Cognitive Computing and Application College of Intelligence and Computing Tianjin University Tianjin China Shenzhen China Department of Electrical and Computer and Engineering National University of Singapore Singapore Co. Ltd. Tianjin China Shenzhen Institute of Advanced Technology Chinese Academy of Sciences Shenzhen China

ISBN: (纸本)9798350368741

A high-quality enrollment speech is crucial to target speaker extraction (TSE), since it provides essential cues for identifying the target speaker in the mixture. However, real applications usually only permit a short enrollment speech, e.g. a wakeup word for a mobile device, that provides limited cues. To address this issue, we propose an enrollment augmentation strategy that allows us to enrich the limited enrollment speech with massive text data through speech synthesis. By doing so, the extended enrollment speech contains enhanced speaker timbre and phonetic content which leads to better extraction quality. Furthermore, we propose a training data augmentation strategy to improve the model's robustness and generalization in short enrollment speech scenarios. Experiments on Libri2Mix demonstrate that our proposed strategies bring a significant improvement in extreme scenarios where only 0.5s and 1-word enrollment speech is provided. We also release our code at https://***/HuangZikang-TJU/Aug4TSE. © 2025 IEEE.

关键词： continue speaking data augmentation short enrollment speech synthesis Target speaker extraction

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Genetic and phenotypic relationships between coronary atherosclerotic heart disease and electrocardiographic traits

Genetic and phenotypic relationships between coronary athero...

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2022 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2022

作者： Wang, Xinfeng Zhang, Haoyang Xiu, Xuehao Qi, Mengling Yang, Yuedong Zhao, Huiying Sun Yat-sen University Key Laboratory of Machine Intelligence and Advanced Computing of Moe School of Computer Science and Engineering Guangzhou China Sun Yat-sen Memorial Hospital Guangdong Provincial Key Laboratory of Malignant Tumor Epigenetics and Gene Regulation Department of Medical Research Center Guangzhou China

ISBN: (纸本)9781665468190

Observational studies have revealed that Coronary Atherosclerotic Heart Disease (CAHD) is associated with abnormal electrocardiogram (ECG) traits. However, it remains unclear whether there are genetic correlations between ECG and CAHD. Here, we explored genetic correlations and putative causal relationships between CAHD and ECG by performing Mendelian randomization (MR) and Polygenic risk score (PRS) analyses on the summary statistics from a large-scale genome-wide association study (GWAS) for CAHD (FinnGen: Ncase 23363, Ncontrol 187840) and ECG traits (UK Biobank: Ncase=1137, Ncontrol=40823). Results showed a causal genetic relationship between CAHD and six ECG traits in the lead V6. These ECG traits combining with age and gender have predicted CAHD risk with an AUC of 0.76. Further summary data-based Mendelian randomization (SMR) analysis identified 11 risk genes associated with the causality between CAHD and ECG. Thus, the revealed putative causal effects of CAHD on ECG traits provide genetic evidence to support the importance of monitoring CAHD risk through the ECG. © 2022 IEEE.

关键词： Electrocardiograms

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Incorporating Retrieval-based Causal Learning with Information Bottlenecks for Interpretable Graph Neural Networks

arXiv

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arXiv 2024年

作者： Rao, Jiahua Xie, Jiancong Lin, Hanjing Zheng, Shuangjia Wang, Zhen Yang, Yuedong School of Computer Science and Engineering Sun Yat-sen University China Shanghai Jiao Tong University China Key Laboratory of Machine Intelligence and Advanced Computing Sun Yat-sen University China

Graph Neural Networks (GNNs) have gained considerable traction for their capability to effectively process topological data, yet their interpretability remains a critical concern. Current interpretation methods are dominated by post-hoc explanations to provide a transparent and intuitive understanding of GNNs. However, they have limited performance in interpreting complicated subgraphs and can’t utilize the explanation to advance GNN predictions. On the other hand, transparent GNN models are proposed to capture critical subgraphs. While such methods could improve GNN predictions, they usually don’t perform well on explanations. Thus, it is desired for a new strategy to better couple GNN explanation and prediction. In this study, we have developed a novel interpretable causal GNN framework that incorporates retrieval-based causal learning with Graph Information Bottleneck (GIB) theory. The framework could semi-parametrically retrieve crucial subgraphs detected by GIB and compress the explanatory subgraphs via a causal module. The framework was demonstrated to consistently outperform state-of-the-art methods, and to achieve 32.71% higher precision on real-world explanation scenarios with diverse explanation types. More importantly, the learned explanations were shown able to also improve GNN prediction performance. © 2024, CC BY-NC-SA.

关键词： Graph neural networks

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Selective Hourglass Mapping for Universal Image Restoration Based on Diffusion Model

arXiv

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arXiv 2024年

作者： Zheng, Dian Wu, Xiao-Ming Yang, Shuzhou Zhang, Jian Hu, Jian-Fang Zheng, Wei-Shi School of Computer Science and Engineering Sun Yat-sen University China School of Electronic and Computer Engineering Peking University China Key Laboratory of Machine Intelligence and Advanced Computing Ministry of Education China

Universal image restoration is a practical and potential computer vision task for real-world applications. The main challenge of this task is handling the different degradation distributions at once. Existing methods mainly utilize task-specific conditions (e.g., prompt) to guide the model to learn different distributions separately, named multi-partite mapping. However, it is not suitable for universal model learning as it ignores the shared information between different tasks. In this work, we propose an advanced selective hourglass mapping strategy based on diffusion model, termed DiffUIR. Two novel considerations make our DiffUIR non-trivial. Firstly, we equip the model with strong condition guidance to obtain accurate generation direction of diffusion model (selective). More importantly, DiffUIR integrates a flexible shared distribution term (SDT) into the diffusion algorithm elegantly and naturally, which gradually maps different distributions into a shared one. In the reverse process, combined with SDT and strong condition guidance, DiffUIR iteratively guides the shared distribution to the task-specific distribution with high image quality (hourglass). Without bells and whistles, by only modifying the mapping strategy, we achieve state-of-the-art performance on five image restoration tasks, 22 benchmarks in the universal setting and zero-shot generalization setting. Surprisingly, by only using a lightweight model (only 0.89M), we could achieve outstanding performance. The source code and pre-trained models are available at https://***/iSEE-laboratory/DiffUIR. Copyright © 2024, The Authors. All rights reserved.

关键词： Image reconstruction

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Selective Hourglass Mapping for Universal Image Restoration Based on Diffusion Model

Selective Hourglass Mapping for Universal Image Restoration ...

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Conference on Computer Vision and Pattern Recognition (CVPR)

作者： Dian Zheng Xiao-Ming Wu Shuzhou Yang Jian Zhang Jian-Fang Hu Wei-Shi Zheng School of Computer Science and Engineering Sun Yat-sen University China School of Electronic and Computer Engineering Peking University China Key Laboratory of Machine Intelligence and Advanced Computing Ministry of Education China

ISBN: (数字)9798350353006

ISBN: (纸本)9798350353013

Universal image restoration is a practical and poten-tial computer vision task for real-world applications. The main challenge of this task is handling the different degra-dation distributions at once. Existing methods mainly utilize task-specific conditions (e.g., prompt) to guide the model to learn different distributions separately, named multi-partite mapping. However, it is not suitable for universal model learning as it ignores the shared information between different tasks. In this work, we propose an advanced selective hourglass mapping strategy based on diffusion model, termed DiffUIR. Two novel considerations make our Dif-fUIR non-trivial. Firstly, we equip the model with strong condition guidance to obtain accurate generation direction of diffusion model (selective). More importantly, DiffUIR integrates a flexible shared distribution term (SDT) into the diffusion algorithm elegantly and naturally, which gradually maps different distributions into a shared one. In the reverse process, combined with SDT and strong condition guidance, DiffUIR iteratively guides the shared distribution to the task-specific distribution with high image quality (hourglass). Without bells and whistles, by only modifying the mapping strategy, we achieve state-of-the-art performance on five image restoration tasks, 22 benchmarks in the universal setting and zero-shot generalization setting. Surprisingly, by only using a lightweight model (only 0.89M), we could achieve outstanding performance. The source code and pre-trained models are available at https://***/iSEE-laboratory/DiffUIR.

关键词： Image quality Computer vision Accuracy Computational modeling Source coding Benchmark testing Diffusion models

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