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Asian Conference on Affective Computing and Intelligent Interaction (ACII Asia)

作者： Xiaohan Xia Jiamu Liu Tao Yang Dongmei Jiang Wenjing Han Hichem Sahli NPU-VUB Joint AVSP Research Lab School of Computer Science Northwestern Polytechnical University (NPU) Shaanxi Key Lab on Speech and Image Information Processing 127 Youyi Xilu Xi’an China Samsum R&D Institute China-Beijing Floor 18 Sun Palace Building 12A Sun Palace Road Chaoyang District Beijing China Interuniversity Microelectronics Centre(IMEC) Kepeldreef 75 Heverlee Belgium

ISBN: (纸本)9781538653128

In this paper, we present our system designed for the video emotion recognition task of the Multimodal Emotion Challenge (MEC 2017). Histogram of Oriented Gradients (HOG), face shape (SHAPE), and geometric (GEO) features are extracted from the detected face images as hand-crafted video features. A pre-trained VGG-Face model is fine-tuned with the face images and emotion labels from the training set of CHEAVD 2.0, the outputs of the penultimate fully-connected layer (FC6) and the last fully-connected layer (FC7) are adopted as Deep Convolutional Neural Network (DCNN) based features. For each video clip, the hand-crafted features and DCNN based features are input into corresponding hidden Markov models (HMMs, one for each emotion class), respectively, for the initial emotion recognitions. The output logarithm likelihood probabilities from the HMMs are then ranked, and the orders constitute an eight-dimensional feature vector as inputs to a Naive Bayes classifier for decision fusion. Experimental results on the CHEAVD 2.0 database show that the combination of FC6, GEO, SHAPE and HOG features obtains the highest macro average precisions (MAPs) on both the validation set (46.61%) and test set (43.88%), which are 12.51% and 22.18% higher than the baseline results, respectively.

关键词： Face Emotion recognition Shape Feature extraction Hidden Markov models Task analysis

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Multidimensional correlation spectroscopic imaging of exponential decays: From theoretical principles to in vivo human applications

arXiv

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arXiv 2018年

作者： Kim, Daeun Wisnowski, Jessica L. Nguyen, Christopher T. Haldar, Justin P. Biomedical Imaging Research Institute Cedars-Sinai Medical Center CA United States Ming Hsieh Department of Electrical and Computer Engineering University of Southern California CA United States Signal and Image Processing Institute University of Southern California CA United States Radiology Children's Hospital Los Angeles CA United States Pediatrics Children's Hospital Los Angeles CA United States Harvard Medical School Cardiovascular Research Center Massachusetts General Hospital MA United States Martinos Center for Biomedical Imaging Radiology Massachusetts General Hospital MA United States

Multiexponential modeling of relaxation or diffusion MR signal decays is a popular approach for estimating and spatially mapping different microstructural tissue compartments. While this approach can be quite powerful, it is also limited by the fact that one-dimensional multiexponential modeling is an ill-posed inverse problem with substantial ambiguities. In this paper, we present an overview of a recent multidimensional correlation spectroscopic imaging approach to this problem. This approach helps to alleviate ill-posedness by leveraging multidimensional contrast encoding (e.g., 2D diffusion-relaxation encoding or 2D relaxation-relaxation encoding) combined with a regularized spatial-spectral estimation procedure. Theoretical calculations, simulations, and experimental results are used to illustrate the benefits of this approach relative to classical methods. In addition, we demonstrate an initial proof-of-principle application of this kind of approach to in vivo human MRI experiments. Copyright © 2018, The Authors. All rights reserved.

关键词： Signal encoding

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Multi-label inductive matrix completion for joint MGMT and IDH1 status prediction for glioma patients 1

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20th International Conference on Medical image Computing and computer-Assisted Intervention, MICCAI 2017

作者： Chen, Lei Zhang, Han Thung, Kim-Han Liu, Luyan Lu, Junfeng Wu, Jinsong Wang, Qian Shen, Dinggang Jiangsu Key Laboratory of Big Data Security and Intelligent Processing Nanjing University of Posts and Telecommunications Nanjing China Department of Radiology and BRIC University of North Carolina Chapel Hill United States School of Biomedical Engineering Med-X Research Institute Shanghai Jiao Tong University Shanghai China Department of Neurosurgery Huashan Hospital Fudan University Shanghai China Shanghai Key Lab of Medical Image Computing and Computer Assisted Intervention Shanghai China

ISBN: (数字)9783319661858

ISBN: (纸本)9783319661841

MGMT promoter methylation and IDH1 mutation in high-grade gliomas (HGG) have proven to be the two important molecular indicators associated with better prognosis. Traditionally, the statuses of MGMT and IDH1 are obtained via surgical biopsy, which is laborious, invasive and time-consuming. Accurate presurgical prediction of their statuses based on preoperative imaging data is of great clinical value towards better treatment plan. In this paper, we propose a novel Multi-label Inductive Matrix Completion (MIMC) model, highlighted by the online inductive learning strategy, to jointly predict both MGMT and IDH1 statuses. Our MIMC model not only uses the training subjects with possibly missing MGMT/IDH1 labels, but also leverages the unlabeled testing subjects as a supplement to the limited training dataset. More importantly, we learn inductive labels, instead of directly using transductive labels, as the prediction results for the testing subjects, to alleviate the overfitting issue in small-sample-size studies. Furthermore, we design an optimization algorithm with guaranteed convergence based on the block coordinate descent method to solve the multivariate non-smooth MIMC model. Finally, by using a precious single-center multi-modality presurgical brain imaging and genetic dataset of primary HGG, we demonstrate that our method can produce accurate prediction results, outperforming the previous widely-used single- or multi-task machine learning methods. This study shows the promise of utilizing imaging-derived brain connectome phenotypes for prognosis of HGG in a non-invasive manner. © Springer International Publishing AG 2017.

关键词： Forecasting

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Multi-scale application of camera calibration in tourism service platforms

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Journal of Information Hiding and Multimedia Signal processing 2017年第4期8卷 929-936页

作者： Ding, Xintao Luo, Yonglong Cai, Guorong Zhang, Xiaobo School of Territorial Resources and Tourism Anhui Normal University No. 819 South Jiuhua Road Wuhu241002 China School of Mathematics and Computer Science Anhui Normal University No. 819 South Jiuhua Road Wuhu241002 China Computer Engineering College Jimei University No. 183 Yinjiang Road Xiamen China Institute of Graphics and Image Processing Xianyang Normal University No. 43 Wenlin Road Xianyang China

Full view panoramas are able to simulate tele-presence or virtual reality experience, thus panoramic technology is an important implementation approach for the visual expression of tourism service platforms (TSP). On one hand, camera calibration, which is generally implemented under a certain resolution, may be a necessary preprocessing stage for panoramic technology. On the other hand, multi-scale applications are potentially involved in TSP for visualization expression. Therefore, calibration parameters resulting in one scale should be extended to multi-scale applications, but the extension research on this topic is insufficient. In this paper, the relations of intrinsic and distortion calibration parameters under different scales were both presented. Then, based on these two claims, a multi-scale correction algorithm is proposed. After demonstration experiments, with the help of the algorithm, different scale panoramas were employed for visualization expression in TSP. The multi-scale application of camera calibration in TSP is beneficial to bring intuition feelings to tourists. © 2017, Ubiquitous International. All rights reserved.

关键词： Calibration

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A Novel Reversible Ternary Embedding Algorithm Based on Modified Full Context Prediction Errors

A Novel Reversible Ternary Embedding Algorithm Based on Modi...

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2016 IEEE International Conference on Signal and image processing

作者： Li Li Chin-Chen Chang K.Bharanitharan Yanjun Liu Institute of Computer Graphics and Image Processing Hangzhou Dianzi University Department of Information Engineering and Computer Science Feng Chia University The Australian National University ACT

We propose a high capacity reversible ternary embedding-watermarking algorithm based on a modification of full-context-prediction-errors(MFCPE) wherein the binary bit stream is converted to the ternary stream then error histogram shifting is utilized to embed the ternary *** the existing predictor methods, we provide a full context prediction with a modification of each pixel at most by 1, which significantly reduces *** results confirm that the proposed algorithm achieves high PSNR while providing a higher embedding ***, results indicate that MFCPE outperforms the existing methods in terms of payload and the watermarked image quality.

关键词： reversible watermarking ternary embedding histogram shifting full context prediction

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Author Correction: Why rankings of biomedical image analysis competitions should be interpreted with care

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Nature communications 2019年第1期10卷 588页

作者： Lena Maier-Hein Matthias Eisenmann Annika Reinke Sinan Onogur Marko Stankovic Patrick Scholz Tal Arbel Hrvoje Bogunovic Andrew P Bradley Aaron Carass Carolin Feldmann Alejandro F Frangi Peter M Full Bram van Ginneken Allan Hanbury Katrin Honauer Michal Kozubek Bennett A Landman Keno März Oskar Maier Klaus Maier-Hein Bjoern H Menze Henning Müller Peter F Neher Wiro Niessen Nasir Rajpoot Gregory C Sharp Korsuk Sirinukunwattana Stefanie Speidel Christian Stock Danail Stoyanov Abdel Aziz Taha Fons van der Sommen Ching-Wei Wang Marc-André Weber Guoyan Zheng Pierre Jannin Annette Kopp-Schneider Division of Computer Assisted Medical Interventions (CAMI) German Cancer Research Center (DKFZ) 69120 Heidelberg Germany. l.maier-hein@dkfz.de. Division of Computer Assisted Medical Interventions (CAMI) German Cancer Research Center (DKFZ) 69120 Heidelberg Germany. Centre for Intelligent Machines McGill University Montreal QC H3A0G4 Canada. Christian Doppler Laboratory for Ophthalmic Image Analysis Department of Ophthalmology Medical University Vienna 1090 Vienna Austria. Science and Engineering Faculty Queensland University of Technology Brisbane QLD 4001 Australia. Department of Electrical and Computer Engineering Department of Computer Science Johns Hopkins University Baltimore MD 21218 USA. CISTIB - Center for Computational Imaging & Simulation Technologies in Biomedicine The University of Leeds Leeds Yorkshire LS2 9JT UK. Department of Radiology and Nuclear Medicine Medical Image Analysis Radboud University Center 6525 GA Nijmegen The Netherlands. Institute of Information Systems Engineering TU Wien 1040 Vienna Austria. Complexity Science Hub Vienna 1080 Vienna Austria. Heidelberg Collaboratory for Image Processing (HCI Heidelberg University 69120 Heidelberg Germany. Centre for Biomedical Image Analysis Masaryk University 60200 Brno Czech Republic. Electrical Engineering Vanderbilt University Nashville TN 37235-1679 USA. Institute of Medical Informatics Universität zu Lübeck 23562 Lübeck Germany. Division of Medical Image Computing (MIC) German Cancer Research Center (DKFZ) 69120 Heidelberg Germany. Institute for Advanced Studies Department of Informatics Technical University of Munich 80333 Munich Germany. Information System Institute HES-SO Sierre 3960 Switzerland. Departments of Radiology Nuclear Medicine and Medical Informatics Erasmus MC 3015 GD Rotterdam The Netherlands. Department of Computer Science University of Warwick Coventry CV4 7AL UK. Department of Radiation Oncology Massachusetts General Hospital Boston MA

In the original version of this Article the values in the rightmost column of Table 1 were inadvertently shifted relative to the other columns. This has now been corrected in the PDF and HTML versions of the Article.

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Reeb graphs through local binary patterns 10

Reeb graphs through local binary patterns

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10th IAPR-TC-15 International Workshop on Graph-Based Representations in Pattern Recognition, GbRPR 2015

作者： Janusch, Ines Kropatsch, Walter G. Pattern Recognition and Image Processing Group Institute of Computer Graphics and Algorithms Vienna University of Technology Vienna Austria

ISBN: (纸本)9783319182230

This paper presents an approach to derive critical points of a shape, the basis of a Reeb graph, using a combination of a medial axis skeleton and features along this skeleton. A Reeb graph captures the topology of a shape. The nodes in the graph represent critical points (positions of change in the topology), while edges represent topological persistence. We present an approach to compute such critical points using Local Binary Patterns. For one pixel the Local Binary Pattern feature vector is derived comparing this pixel to its neighbouring pixels in an environment of a certain radius. We start with an initial segmentation and a medial axis representation. Along this axis critical points are computed using Local Binary Patterns with the radius, defining the neighbouring pixels, set a bit larger than the radius according to the medial axis transformation. Critical points obtained in this way form the node set in a Reeb graph, edges are given through the connectivity of the skeleton. This approach aims at improving the representation of flawed segmented data. In the same way segmentation artefacts, as for example single pixels representing noise, may be corrected based on this analysis. © Springer International Publishing Switzerland 2015.

关键词： image segmentation

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SAR image Despeckling Using Scale Mixtures of Gaussians in the Nonsubsampled Contourlet Domain

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Chinese Journal of Electronics 2015年第1期24卷 205-211页

作者： CHANG Xia JIAO Licheng LIU Fang SHA Yuheng Institute of Image Processing and Understanding School of Mathematics and Information Science Beifang University of Nationalities Key Laboratory of Intelligent Perception and Image Understanding of Ministry of Education of China International Research Center for Intelligent Perception and Computation Xidian University School of Computer Science and Technology Xidian University

The edge and contour details in SAR images are important for subsequent processing tasks. The multiscale geometric analysis method — Nonsubsampled contourlet transform(NSCT) is able to capture the geometric information of SAR images effectively. Describing the aggregation behavior of the neighborhoods coefficients, the scale mixtures of Gaussians model has exhibited favorable performances. A novel SAR image despeckling method is presented by constructing the scale mixtures of Gaussians model of NSCT. This method models the SAR images using the multiscale and multidirection information in NSCT domain. The dependency relationship of NSCT neighborhoods coefficients are also taken into consideration in our model. The speckle noise coefficients are shrinkaged by statistical prior estimation based on SAR image model constructed. Experimental results demonstrate that our method is advantageous at directional information preservation and the speckle restraint.

关键词： Synthetic aperture radar(SAR) image despeckling Stationary wavelet transform Nonsubsampled contourlet transform Scale mixtures of Gaussians model.

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A Web-Based Tool for Semi-Automated Segmentation of Histopathological images Using Nonlinear Color Classifiers

A Web-Based Tool for Semi-Automated Segmentation of Histopat...

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Annual IEEE Symposium on computer-Based Medical Systems

作者： Marcelo Dornbusch Lopes Antonio C. Sobieranski Aldo Von Wangenheim Eros Comunello INCoD - National Brazilian Institute for Digital Convergence / LAPIX - Image Processing and Computer Graphics Lab - Federal University of Santa Catarina Brazil Postgraduate Program in Applied Computing University of Itajai Valley - UNIVALI INCoD (Nat. Brazilian Inst. for Digital Convergence) LAPIX (Image Process. & Comput. Graphics Lab.) Universidade Federal de Santa Catarina Florianopolis SC BR

ISBN: (纸本)9781467390378

Histopathological staining is a technique widely used to highlight biological states or pharmacological activities in uman tissue. A quantitative analysis of the resulting images can produce biomarkers for diseases or even other specific conditions, thus providing valuable information for diagnosis and prognosis. Since biomarkers require measurements to be made in an objective and consistent way, software systems are employed to provide this quantitative analysis. For measurements to be reproducible, the same methods must be available across different laboratories. In this paper, we present a tool that allows users to perform quantitative analyses over the web, thus providing an efficient environment not only for individual cases to be evaluated, but also for users to share a common ground when making measurements. The classification method used by the tool to segment stained pixels is performed by a similarity function based on the polynomial version of the Mahalanobis distance, which is nonlinear and provides very robust classification for m-dimensional feature spaces. Furthermore, the similarity function can be generalized in the tool, so that images can be classified by reusing parameters of previous cases. The results of our web-based approach were compared with established ground-truth data sets, producing sensitivity, specificity and fitness values of 97.09%, 98.70%, and 97.90%.

关键词： image color analysis image segmentation Biomarkers Sensitivity Inspection Servers Statistical analysis

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Identifying the best machine learning algorithms for brain tumor segmentation, progression assessment, and overall survival prediction in the BRATS challenge

arXiv

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arXiv 2018年

作者： Bakas, Spyridon Reyes, Mauricio Jakab, Andras Bauer, Stefan Rempfler, Markus Crimi, Alessandro Shinohara, Russell Takeshi Berger, Christoph Ha, Sung Min Rozycki, Martin Prastawa, Marcel Alberts, Esther Lipkova, Jana Freymann, John Kirby, Justin Bilello, Michel Fathallah-Shaykh, Hassan M. Wiest, Roland Kirschke, Jan Wiestler, Benedikt Colen, Rivka Kotrotsou, Aikaterini Lamontagne, Pamela Marcus, Daniel Milchenko, Mikhail Nazeri, Arash Weber, Marc-Andr Mahajan, Abhishek Baid, Ujjwal Gerstner, Elizabeth Kwon, Dongjin Acharya, Gagan Agarwal, Manu Alam, Mahbubul Albiol, Alberto Albiol, Antonio Albiol, Francisco J. Alex, Varghese Allinson, Nigel Amorim, Pedro H.A. Amrutkar, Abhijit Anand, Ganesh Andermatt, Simon Arbel, Tal Arbelaez, Pablo Avery, Aaron Azmat, Muneeza Pranjal, B. Bai, Wenjia Banerjee, Subhashis Barth, Bill Batchelder, Thomas Batmanghelich, Kayhan Battistella, Enzo Beers, Andrew Belyaev, Mikhail Bendszus, Martin Benson, Eze Bernal, Jose Bharath, Halandur Nagaraja Biros, George Bisdas, Sotirios Brown, James Cabezas, Mariano Cao, Shilei Cardoso, Jorge M. Carver, Eric N. Casamitjana, Adri Castillo, Laura Silvana Cat, Marcel Cattin, Philippe Cérigues, Albert Chagas, Vinicius S. Chandra, Siddhartha Chang, Yi-Ju Chang, Shiyu Chang, Ken Chazalon, Joseph Chen, Shengcong Chen, Wei Chen, Jefferson W. Chen, Zhaolin Cheng, Kun Choudhury, Ahana Roy Chylla, Roger Clrigues, Albert Colleman, Steven Colmeiro, Ramiro German Rodriguez Combalia, Marc Costa, Anthony Cui, Xiaomeng Dai, Zhenzhen Dai, Lutao Daza, Laura Alexandra Deutsch, Eric Ding, Changxing Dong, Chao Dong, Shidu Dudzik, Wojciech Eaton-Rosen, Zach Egan, Gary Escudero, Guilherme Estienne, Tho Everson, Richard Fabrizio, Jonathan Fan, Yong Fang, Longwei Feng, Xue Ferrante, Enzo Fidon, Lucas Fischer, Martin French, Andrew P. Fridman, Naomi Fu, Huan Fuentes, David Gao, Yaozong Gates, Evan Gering, David Gholami, Amir Gierke, Willi Glocker, Ben Gong, Mingming Gonzlez-Vill, Sandra Grosges, T. Guan, Yuanfang Guo, Sheng Gupta, Sudeep Han, Woo-Sup Han, Il Song Harmuth, Ko Center for Biomedical Image Computing and Analytics University of Pennsylvania PhiladelphiaPA United States Department of Radiology Perelman School of Medicine University of Pennsylvania PhiladelphiaPA United States Department of Pathology and Laboratory Medicine Perelman School of Medicine University of Pennsylvania PhiladelphiaPA United States Institute for Surgical Technology and Biomechanics University of Bern Bern Switzerland Center for MR-Research University Children's Hospital Zurich Zurich Switzerland Support Centre for Advanced Neuroimaging Inselspital Institute for Diagnostic and Interventional Neuroradiology Bern University Hospital Bern Switzerland University Hospital of Zurich Zurich Switzerland Center for Clinical Epidemiology and Biostatistics University of Pennsylvania Philadelphia United States Image-Based Biomedical Modeling Group Technical University of Munich Munich Germany Icahn School of Medicine Mount Sinai Health System New YorkNY United States Leidos Biomedical Research Inc. Frederick National Laboratory for Cancer Research FrederickMD21701 United States Cancer Imaging Program National Cancer Institute National Institutes of Health BethesdaMD20814 United States Department of Neurology University of Alabama at Birmingham BirminghamAL United States Department of Diagnostic Radiology University of Texas MD Anderson Cancer Center HoustonTX United States Department of Psychology Washington University St. LouisMO United States Neuroimaging Informatics and Analysis Center Washington University St. LouisMO United States Department of Radiology Washington University St. LouisMO United States Institute of Diagnostic and Interventional Radiology Pediatric Radiology and Neuroradiology University Medical Center Rostock Ernst-Heydemann-Str. 6 Rostock18057 Germany Tata Memorial Centre Homi Bhabha National Institute Mumbai India Shri Guru Gobind Singhji Institute of Engineering and Technology Nanded India NVIDIA Santa Clara

Gliomas are the most common primary brain malignancies, with different degrees of aggressiveness, variable prognosis and various heterogeneous histologic sub-regions, i.e., peritumoral edematous/invaded tissue, necrotic core, active and non-enhancing core. This intrinsic heterogeneity is also portrayed in their radio-phenotype, as their sub-regions are depicted by varying intensity profiles disseminated across multi-parametric magnetic resonance imaging (mpMRI) scans, reflecting varying biological properties. Their heterogeneous shape, extent, and location are some of the factors that make these tumors difficult to resect, and in some cases inoperable. The amount of resected tumor is a factor also considered in longitudinal scans, when evaluating the apparent tumor for potential diagnosis of progression. Furthermore, there is mounting evidence that accurate segmentation of the various tumor sub-regions can offer the basis for quantitative image analysis towards prediction of patient overall survival. This study assesses the state-of-the-art machine learning (ML) methods used for brain tumor image analysis in mpMRI scans, during the last seven instances of the International Brain Tumor Segmentation (BraTS) challenge, i.e., 2012-2018. Specifically, we focus on i) evaluating segmentations of the various glioma sub-regions in pre-operative mpMRI scans, ii) assessing potential tumor progression by virtue of longitudinal growth of tumor sub-regions, beyond use of the RECIST/RANO criteria, and iii) predicting the overall survival from pre-operative mpMRI scans of patients that underwent gross total resection. Finally, we investigate the challenge of identifying the best ML algorithms for each of these tasks, considering that apart from being diverse on each instance of the challenge, the multi-institutional mpMRI BraTS dataset has also been a continuously evolving/growing dataset. Copyright © 2018, The Authors. All rights reserved.

关键词： Tumors

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