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International Conference on Systems and Informatics (ICSAI)

作者： Yidan Lv Yan Wang Yongfei Tan Wei Du Keke Liu Hao Wang Key Laboratory of Symbol Computation and Knowledge Engineering of Ministry of Education Jilin University Changchun China Basic Medicine School Jilin University Changchun China Department of Hepatopancreatobiliary Surgery and Second Affiliated Hospital Harbin Medical University Harbin China

Pancreatic cancer acts as one of the leading causes of cancer-connective deaths. Its five-year overall survival rate being reported is about 7.7% from 2006 to 2012 by the National Cancer Institute. One of the main causes for its poor prognosis is because its non-typical symptoms make early diagnosis very challenging. Therefore, a predominant strategy for early accurate detection and prognostication on pancreatic cancer is vital to the whole course of comprehensive therapy. In this research, we proposed a method which combined Recursive Feature Elimination (RFE) method based on Support Vector Machine (SVM) and Large Margin Distribution Machine (LDM) to identify potential biomarkers for pancreatic cancer. In our experiments, we have strengthened the process of RFE to achieve better performance. The dataset GSE15471 we adopted are from GEO database with 39 pairs of pancreatic ductal carcinoma and adjacent control pancreatic tissues. Through experiments, a panel of twelve genes was identified as biomarkers in pancreatic cancer with 91.28% classification accuracy. The universality of the candidate genes was examined on another dataset GSE28735 and the classification accuracy was higher than 80%. In addition, by using the SVM, LDM and BP classifiers, we compared the ordered feature sets generated by our proposed method with T-test, SVM-RFE and LDM-RFE, and the results indicated our proposed method obtained higher average classification accuracy.

关键词： Cancer Support vector machines Feature extraction Tumors Training data Testing

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A New Seamless Multi-resolution Simplification Method for the Terrain Model

A New Seamless Multi-resolution Simplification Method for th...

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Web Intelligence and Intelligent Agent Technology Workshops (WI-IAT)

作者： Huijie Zhang Jigui Sun Changsong Qi Nan Lv College of Computer Northeast Normal University Changchun China College of Computer Science & Technology Jilin University Changchun China College of Computer Science & Technology Key Laboratory of Symbol Computation and Knowledge Engineering of the Ministry of Education Jilin University China

This paper presents a fast method to construct the simplified terrain model with the multi-resolution. In this method, we adopt the normal quad-tree hierarchy to subdivide the original terrain surface into the multi- resolution levels. For the sake of implementing the compressive storage and the efficient index for the elevation data, a connotative hierarchy is proposed and its corresponding index strategies are deduced. On the basis of the connotative hierarchy, we focus on resolving the crack problem of the simplified model. We firstly create the space filling curve during the simplification process to accelerate the search for the potential cracks. Afterwards, the different approaches are utilized to process the cracks in terms of the dissimilar terrain features. For this reason, we put forward an evaluation function that can selfadaptively identify the terrain feature according to the normal vector angle of the adjacent nodes in the connotative hierarchy. Consequently, there are not redundant triangles in our seamless multi-resolution terrain model. The proposed approaches are experimented on the real data and the results show that our method is relatively efficient and robust. Besides, the seamless simplified model has less number of triangles than the other common algorithm.

关键词： Multiresolution analysis Educational institutions Intelligent agent Computer science Surface cracks Filling Conferences Acceleration Robustness Sun

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Neural architecture search based on the cartesian genetic programming

arXiv

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arXiv 2021年

作者： Wu, Xuan Zhang, Xiuyi Jia, Linhan Chen, Liang Liang, Yanchun Zhou, You Wu, Chunguo Key Laboratory of Symbolic Computation Knowledge Engineering of Ministry of Education College of Computer Science and Technology Jilin University Changchun130012 China College of Software Jilin University Changchun130012 China School of Computer Science Zhuhai College of Science and Technology Zhuhai519041 China

Neural architecture search (NAS) is a hot topic in the field of automated machine learning and outperforms humans in designing neural architectures on quite a few machine learning tasks. Motivated by the natural representation form of neural networks by Cartesian Genetic Programming (CGP), we propose an evolutionary approach of NAS based on CGP, called CGPNAS, to solve sentence classification task. To evolve the architectures under the framework of CGP, the operations such as convolution are identified as the types of function nodes of CGP, and the evolutionary operations are designed based on Evolutionary Strategy. The experimental results show that the searched architectures are comparable with the performance of human-designed architectures. We verify the ability of domain transfer of our evolved architectures and the transfer experimental results show that the accuracy deterioration is lower than 2-5%. Finally, the ablation study identifies the Attention function as the single key function node and the linear transformations along could keep the accuracy similar with the full evolved architectures, which is worthy of investigation in the future. Copyright © 2021, The Authors. All rights reserved.

关键词： Genetic algorithms

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Improved cross-media relevance model for automatic image annotation

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ICIC Express Letters, Part B: Applications 2012年第5期3卷 1231-1237页

作者： Song, Haiyu Li, Xiongfei Wang, Pengjie Bao, Cuizhu Liu, Yongkui Xu, Lu Institute of Computer Graphics and Image Processing Dalian Nationalities University No. 18 Liaohe Road Economic and Technological Development Zone-Dalian 116600 China Key Laboratory of Symbol Computation and Knowledge Engineering Ministry of Education Jilin University No. 2699 Qianjin Avenue Changchun 130012 China

Automatic image annotation has been an active research topic in the last decade due to its potentially large impact on image retrieval, object recognition and image understanding. Many approaches have been proposed for image annotation in recent years. The most influential annotation model is relevance model, whose representative algorithm is Cross-Media Relevance Model (CMRM). In this paper, to overcome the shortcomings of the original CMRM, we propose improved CMRM. In the improved CMRM, the annotation word distribution is estimated using binary probability, the significance of blob is discriminately depicted using TF-IDF (term frequency-inverse document frequency) schemes, and the similarity measurement of blob is based on blob and continuousvalued feature vector. The experimental results on the standard Corel5K dataset show that our proposed approach outperforms the original CMRM by about 111% and 73% in terms of F1 and N+ measures respectively. The improved CMRM can get better performance in specific domains such as cultural heritage and special necessities digitization for ethnic minorities. © 2012 ICIC International.

关键词： Image retrieval

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Translating Query for Deep Web Using Ontology

Translating Query for Deep Web Using Ontology

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International Conference on Computer Science and Software engineering

作者： Hao Liang Wanli Zuo Fei Ren Junhua Wang College of Computer Science and Technology Department of Technology Jilin University Changchun Taxation China College of Computer Science and Technology Key Laboratory of Symbol Computation andKnowledge Engineering of the Ministry of Education Jilin University China College of Computer Science and Technology Jilin University Changchun China College of Computer Science and Technology Jilin University Key Laboratory of Symbolic Computation and Knowledge Engineering of Ministry of Education Changchun China

ISBN: (纸本)9781424439027

The e-commerce information on the surface Web is supported by the Deep Web, which can not be accessed directly by the search engines or the Web crawlers. The only way to access the backend database is through query interface. Extracting valid attributes from the query forms and automatic translating the source query into a target query is a solvable way for addressing the current limitations in accessing Deep Web data sources. To generate a valid query, we have to reconcile the key attributes and their semantic relation. We present our framework to solve the problem. To enrich the set of attributes contained in the semantic form, we use the WordNet as kinds of ontology technique and we try to find the semantic relation of the attributes in the same query from and different forms. Extensive experiments over real-word domains show the utility of our query translation framework.

关键词： Ontologies Databases Computer science Educational institutions Search engines Data mining Laboratories knowledge engineering Computer science education Crawlers

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Automatic Detection of Lumbar Spondylolisthesis and Instability Using Supine Magnetic Resonance Images

SSRN

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SSRN 2023年

作者： Liu, Zewen Zhang, Han Zhao, Hang Liu, Yuwu Zhang, Chi Shi, Xiaohu College of Software Jilin University Changchun130021 China Guangyuan Central Hospital China College of Computer Science and Technology Jilin University Changchun130021 China Key Laboratory of Symbol Computation and Knowledge Engineering Ministry of Education Changchun130021 China

Background and Objective: Lumbar spondylolisthesis is a condition in which one vertebra is displaced relative to the vertebra below it. Lumbar instability can be divided into static and dynamic spondylolisthesis depending on whether the degree of slippage changes significantly in images taken in different postures. Usually, the degree of slippage of lumbar instability is not obvious on magnetic resonance (MR) images taken in the supine position;therefore, it is easy to miss the detection of spondylolisthesis with lumbar instability based on slippage. This feature of lumbar instability also poses a challenge for the automatic detection of dynamic spondylolisthesis, particularly in supine MR images. This study aimed to develop a two-stage model for the automatic detection of spondylolisthesis and lumbar instability using supine MR ***: Specifically, we used You Only Look Once (YOLO) to detect and crop consecutive images near the intervertebral discs (IVDs) on both sagittal and transverse axis magnetic resonance images, and then classified the cropped images using weight-sharing convolutional neural networks (CNNs). Consistency regularization and a new contrast loss function ware also developed to improve the robustness. The MR data we used includes 108 mixed samples of lumbar instability and spondylolisthesis (39 cases of lumbar instability and 69 cases of spondylolisthesis) and 182 normal ***: We found that YOLO could detect the complete image sequence between L1 and S1 with 97.24% accuracy (ACC). Compared with the ground truth labels, the mean of intersection over union (mIOU) is 84.58%. In addition, the ACC and mIoU for transverse axis image are 98.62% and 85.71% respectively. In the classification stage, CNN achieved a maximum ACC of 97.9% with transverse axis image as inputs and using consistency ***: While MR images offer a wider range of applications in disease detection compared to X-rays, the identification of con

关键词： Stability

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An adaptive multi-heuristic ant colony system for finding optimal elimination orderings in Bayesian networks

An adaptive multi-heuristic ant colony system for finding op...

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International Conference on Electrical engineering, Computing Science and Automatic Control (CCE)

作者： Xuchu Dong Yonggang Zhang Dianbo Cai Haihong Yu Yuxin Ye Department of Computer Science and Technology Jilin University Changchun Jilin China Key Laboratory of Symbol Computation and Knowledge Engineering Ministry of Education Changchun Jilin China Network Monitor Maintenance Centre China Telecom Corporation Limited Changchun Jilin China

To find an optimal elimination ordering for Bayesian networks, a multi-heuristic-based ant colony system named MHC-HS-ACS is proposed. MHC-HS-ACS uses a set of heuristics to guide the ants to search solutions. The heuristic set can evolve with the searching procedure in an adaptive way. MHC-HS-ACS also utilizes a heuristic-based local search to accelerate its convergence. computational experiments show that MHC-HS-ACS can find very high quality solutions.

关键词： Bayesian methods Ethics Junctions Conferences Electrical engineering IEEE catalog Inference algorithms

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Cooperative coevolutionary genetic algorithms to find optimal elimination orderings for Bayesian networks

Cooperative coevolutionary genetic algorithms to find optima...

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International Conference on Bio-Inspired Computing: Theories and Applications, BICTA

作者： Xuchu Dong HaiHong Yu Dantong Ouyang Dianbo Cai Yuxin Ye Yonggang Zhang Department of Computer Science and Technology Jilin University Changchun Jilin China Key Laboratory of Symbol Computation and Knowledge Engineering Ministry of Education Changchun Jilin China Network Monitor Maintenance Centre China Telecom Corporation Limited Changchun Jilin China

According to the characteristics of the optimal elimination ordering problem in Bayesian networks, a heuristic-based genetic algorithm, a cooperative coevolutionary genetic framework and five grouping schemes are proposed. Based on these works, six cooperative coevolutionary genetic algorithms are constructed. Numerical experiments show that these algorithms are more robust than other existing swarm intelligence methods when solving the elimination ordering problem.

关键词： Genetics Bayesian methods Robustness

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MI-CAT: A Transformer-Based Domain Adaptation Network for Motor

SSRN

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SSRN 2023年

作者： Zhang, Dongxue Li, Huiying Xie, Jingmeng Jilin University College of Computer Science and Technology Jilin Province Changchun China Key Laboratory of Symbol Computation and Knowledge Engineering Jilin University Changchun130012 China Xi’an Jiaotong University College of Electronic information Shanxi Province Xi’an China

Due to its convenience and safety, electroencephalography (EEG) data is one of the most widely used signals in motor imagery (MI) brain-computer interfaces (BCIs). In recent years, methods based on deep learning have been widely applied to the field of BCIs, and some studies have gradually tried to apply Transformer to EEG signal decoding due to its superior global information focusing ability. However, EEG signals vary from subject to subject. Based on Transformer, how to effectively use data from other subjects (source domain) to improve the classification performance of a single subject (target domain) remains a challenge. To fill this gap, we propose a novel architecture called MI-CAT. The architecture innovatively utilizes Transformer's self-attention and cross-attention mechanisms to interact features to resolve differential distribution between different domains. Specifically, we adopt a patch embedding layer for the extracted source and target features to divide the features into multiple patches. Then, we comprehensively focus on the intra-domain and inter-domain features by stacked multiple Cross-Transformer Blocks (CTBs), which can adaptively conduct bidirectional knowledge transfer and information exchange between domains. Furthermore, we also utilize two non-shared domain-based attention blocks to efficiently capture domain-dependent information, optimizing the features extracted from the source and target domains to assist in feature alignment. To evaluate our method, we conduct extensive experiments on two real public EEG datasets, Dataset IIb and Dataset IIa, achieving competitive performance with an average classification accuracy of 85.26% and 76.81%, respectively. Experimental results demonstrate that our method is a powerful model for decoding EEG signals and facilitates the development of the Transformer for brain-computer interfaces (BCIs). © 2023, The Authors. All rights reserved.

关键词： Classification (of information)

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Prediction of ncRNA based on least squares support vector machine

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Journal of Bionanoscience 2013年第1期7卷 121-125页

作者： Xing, Chong Wan, Liming Wang, Jiaxin Liang, Yanchun College of Electrical and Information Engineering Guanghua College of Changchun University Changchun 130033 China College of Computer Science and Technology Jilin University Key Laboratory of Symbol Computation and Knowledge Engineering of Ministry of Education Changchun 130012 China Research Institute on General Development and Evaluation of Equipment EAAF of PLA Beijing 100076 China

In this paper, on the basis of principal component analysis, we use least squares support vector machine (LS-SVM) to predict tRNA. Appearance frequencies of single nucleotide, 2-nucleotides, (G-C)% and (A-T)% were chosen as characteristic inputs. Results from tests showed that the prediction accuracy was 90.51% on prokaryotic tRNA dataset. The results indicate that the proposed method is adoptable for prokaryotic ncRNA prediction. Copyright © 2013 American Scientific Publishers.

关键词： RNA

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