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Demographic and selective histories of four high altitude juniper species in the Qinghai-Tibetan Plateau:implications for speciation

Demographic and selective histories of four high altitude ju...

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后植物志时代的系统与进化植物学——2011年全国系统与进化植物学暨第十届青年学术研讨会

作者： Thomas Kllman Martin Lascoux program in Evolutionary Functional Genomics Evolutionary Biology CentreUppsala UniversityNorbyvgen18D75326 UppsalaSweden Laboratory of Evolutionary Genomics CAS-MPG Partner Institute for Computational BiologyChinese Academy of SciencesShanghaiChina 4program in Evolutionary Functional Genomics Evolutionary Biology CentreUppsala UniversityNorbyvgen18D75326 UppsalaSweden

Nucleotide variation at 13 nuclear loci was studied in four closely related endemic juniper species from the Qinghal-Tibetan Plateau(QTP),Juniperus tibetica,***,***,and ***. The first three are parapatric and/or sympatric and grow along the Himalayas where they apparently survived the Last Glacial Maximum(LGM).The fourth one,***,grows on the northeastern platform and edge of the QTP and was restricted to the latter during the *** contrast to the relatively high level of nucleotide variation observed in pine and spruce species from the QTP,the nucleotide

关键词： Demographic and selective histories of four high altitude juniper species in the Qinghai-Tibetan Plateau:implications for speciation

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Adaptive evolution and ecological speciation between Populus euphratica and ***:evidence from the transcriptome orthologs

Adaptive evolution and ecological speciation between Populus...

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后植物志时代的系统与进化植物学——2011年全国系统与进化植物学暨第十届青年学术研讨会

作者： Martin Lascoux Thomas Meagher Laboratory of Evolutionary Genomics CAS-MPG Partner Institutefor Computational BiologyChinese Academy of SciencesShanghaiChina Program in Evolutionary Functional Genomics Evolutionary Biology CentreUppsala UniversityNorbyvgen18D75326 UppsalaSweden School of Biology Mitchell BuildingUniversity of St AndrewsSt AndrewsFife KY16 9THUK

Adaptive evolution and ecological divergences with gene flow were suggested to be common between the closely related species with parapatric *** aimed to test this assumption in two poplar species,Popidus euphratica and ***,which diverged in the recent past in the *** firstly conducted the deep transcriptomic analyses of *** we aligned transcriptomes of this species and *** with the genome sequences of *** and generated orthologous sequence alignments for 5,537 potential *** on the ratio of nonsynonymous to synonymous substitutions, we identified four and six candidate sequences(genes) in *** and *** respectively, exhibiting a signature of strong natural selection(Ka/Ks>1).These genes are involved in stimulus, metabolic and cellular process,immune responses and biological regulations of two species during their ecological adaptation to arid *** then selected 2,383 orthologous sequences with nearly‘neutral' evolution to examine alternative speciation hypotheses between two *** coalescent tests obviously supported the hypothesis of the ecological speciation with gene flow between two *** findings provides a good example to infer adaptive evolution and speciation history between closely related non-model plant species based on transcriptome data using next-generation sequencing technologies.

关键词： Illumina/Solexa sequencing Populus pruinosa transcriptome adaptive evolution speciation coalescent test

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West Side Story: Regional Inter-Troop Variation in Baboon Bark-Stripping at Gorongosa National Park, Mozambique

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American Journal of Biological Anthropology 2025年第1期187卷 e70057页

作者： Biro, Dora Muschinski, Jana Hammond, Philippa Bobe, René Bamford, Marion K. Capelli, Cristian d’Oliveira Coelho, João Farassi, Rassina Lüdecke, Tina Martinez, Felipe I. Mathe, Jacinto Silva, Maria Joana Ferreira Carvalho, Susana Department of Brain and Cognitive Sciences University of Rochester Rochester NY United States Primate Models for Behavioural Evolution Lab Institute of Human Sciences School of Anthropology and Museum Ethnography University of Oxford Oxford United Kingdom Interdisciplinary Center for Archaeology and Evolution of Human Behaviour (ICArEHB) University of Algarve Faro Portugal Department of Science Gorongosa National Park Sofala Mozambique Evolutionary Studies Institute University of the Witwatersrand Johannesburg South Africa Department of Chemistry Life Sciences and Environmental Sustainability University of Parma Parma Italy Centre for Functional Ecology (CFE) Department of Life Sciences Universidade de Coimbra Coimbra Portugal Departamento de Ciências da Vida Universidade de Coimbra Coimbra Portugal Emmy Noether Group for Hominin Meat Consumption Max Planck Institute for Chemistry Mainz Germany Escuela de Antropología Facultad de Ciencias Sociales Pontificia Universidad Católica de Chile Ciudad de México Chile CIBIO Centro de Investigação Em Biodiversidade e Recursos Genéticos InBIO Laboratório Associado Campus de Vairão Universidade do Porto Vairão Portugal BIOPOLIS Program in Genomics Biodiversity and Land Planning CIBIO Vairão Portugal One Organisms and Environment Division School of Biosciences Cardiff University Cardiff United Kingdom

Objectives: Baboons possess sophisticated physical and social cognitive abilities;hence, the lack of evidence to date of large-scale behavioral variation in these primates is puzzling. Here we studied a candidate for such variation—the stripping of bark from Acacia robusta trees for consumption of the sap and soft tissue underneath—in Gorongosa National Park, Mozambique. Materials and Methods: We surveyed an area inhabited by ~60 troops of chacma baboons, recording the availability and characteristics of the target trees, as well as the presence or absence of bark-stripping at 45 habitat plots distributed across a grid covering an area of ~300 km². Results: Camera traps confirmed the presence of baboons at all habitat plots, and we identified regional clumping in the distribution of the behavior, a pattern consistent across two consecutive years. Proportion and mean height/width of A. robusta did not predict whether bark-stripping behavior was present at a given site, nor did broader ecological variables such as habitat type and distance to the nearest water source. However, stripping sites had significantly higher numbers of A. robusta than non-stripping sites, and within a given bark-stripping site, baboons preferred to strip taller and wider trees among those available. Discussion: The prominent geographical clustering we uncovered may have been driven by opportunity (i.e., the prevalence of A. robusta at a given site), but is also consistent with a possible (non-mutually exclusive) cultural interpretation. We propose avenues for future research on Gorongosa's baboons to better quantify the relative contributions of ecology, genetics, and social learning to the prevalence of bark stripping. We also briefly consider the potential relevance of baboon bark stripping to elucidating early hominin foraging strategies. © 2025 Wiley Periodicals LLC.

关键词： a cacia bark-stripping behavioral variation chacma baboon habitat survey non-technological material traces

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ZokorDB: tissue specific regulatory network annotation for non-coding elements of plateau zokor

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Quantitative Biology 2020年第1期8卷 43-50页

作者： Jingxue Xin Junjun Hao Lang Chen Tao Zhang Lei Li Luonan Chen Wenmin Zhao Xuemei Lu Peng Shi Yong Wang CEMS NCMISMDISAcademy of Mathematics and Systems ScienceChinese Academy of SciencesBeijing 100190China State Key Laboratory of Genetic Resources and Evolution Laboratory of Evolutionary and Functional GenomicsKunming Institute of ZoologyChinese Academy of SciencesKunming 650223China Key Laboratory of Systems Biology Innovation Center for Cell Signaling NetworkInstitute of Biochemistry and Cell BiologyShanghai Institutes for Biological SciencesChinese Academy of SciencesShanghai 200031China Beijing Institute of Genomics Chinese Academy of SciencesBeijing 100101China Center for Excellence in Animal Evolution and Genetics Chinese Academy of SciencesKunming 650223China Department of Statistics Department of Biomedical Data ScienceBio-X ProgramStanford UniversityStanfordCA 94305USA University of Chinese Academy of Sciences Beijing 100049China

Background:Plateau zokor inhabits in sealed burrows from 2,000 to 4,200 meters at Qinghai-Tibet *** extreme living env ironment makes it a great model to study animal adaptation to hypoxia,low temperature,and high carbon dioxide ***:We provide an integrated resource,ZokorDB,for tissue specific regulatory network annotation for *** is based on a high-quality draft genome of a plateau zokor at 3,300 m and its transcriptional profiles in brain,heart,liver,kidney,and *** conserved non-coding elements of zokor are annotated by their nearest genes and upstream transcriptional factor motif binding ***:ZokorDB provides a general draft gene regulatory network(GRN),Le?potential transcription factor(TF)binds to non-coding regulatory elements and regulates the expression of target genes(TG).Furthermore,we refined the GRN by incorporating matched RNA-seq and DNase-seq data from mouse ENCODE project and reconstructed five tissue-specific regulatory ***:A web-based,open-access database is developed for easily searching,visualizing,and downloading the annotation and *** pipeline of non-coding region annotation for zokor will be useful for other non-model *** is free available at the website(***/zokordb/).

关键词： tissue specific regulatory network non-coding element plateau zokor non-model species

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Erratum to: Development of eleven microsatellite markers in the red-listed tree species Myristica malabarica

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Conservation Genetics Resources 2010年第1期3卷 195-195页

作者： Hemmilä, S. Mohana Kumara, P. Ravikanth, G. Gustafsson, S. Vasudeva, R. Ganeshaiah, K. N. Uma Shaanker, R. Lascoux, M. Program in Evolutionary Functional Genomics EBC Uppsala University Uppsala Sweden Department of Crop Physiology University of Agricultural Sciences Bangalore India School of Ecology and Conservation University of Agricultural Sciences Bangalore India Ashoka Trust for Research in Ecology and the Environment Bangalore India Department of Forest Biology and Tree Improvement College of Forestry University of Agricultural Sciences Sirsi India Department of Forestry and Environmental Sciences University of Agricultural Sciences Bangalore India

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The extinct Sicilian wolf shows a complex history of isolation and admixture with ancient dogs

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iScience 2023年第8期26卷 107307页

作者： Ciucani, Marta Maria Ramos-Madrigal, Jazmín Hernández-Alonso, Germán Carmagnini, Alberto Aninta, Sabhrina Gita Sun, Xin Scharff-Olsen, Camilla Hjorth Lanigan, Liam Thomas Fracasso, Ilaria Clausen, Cecilie G. Aspi, Jouni Kojola, Ilpo Baltrūnaitė, Laima Balčiauskas, Linas Moore, Jane Åkesson, Mikael Saarma, Urmas Hindrikson, Maris Hulva, Pavel Bolfíková, Barbora Černá Nowak, Carsten Godinho, Raquel Smith, Steve Paule, Ladislav Nowak, Sabina Mysłajek, Robert W. Lo Brutto, Sabrina Ciucci, Paolo Boitani, Luigi Vernesi, Cristiano Stenøien, Hans K. Smith, Oliver Frantz, Laurent Rossi, Lorenzo Angelici, Francesco Maria Cilli, Elisabetta Sinding, Mikkel-Holger S. Gilbert, M. Thomas P. Gopalakrishnan, Shyam Section for Evolutionary Genomics the Globe Institute University of Copenhagen Copenhagen Denmark Center for Evolutionary Hologenomics the Globe Institute University of Copenhagen Copenhagen Denmark Palaeogenomics Group Department of Veterinary Sciences Ludwig Maximilian University Munich Germany School of Biological and Behavioural Sciences Queen Mary University of London London United Kingdom Forest Ecology Unit Research and Innovation Centre Fondazione Edmund Mach San Michele all'Adige (TN) Italy Ecology and Genetics Research Unit University of Oulu Finland Natural Resources Institute Finland Rovaniemi Finland Nature Research Centre Vilnius Lithuania Società Amatori Cirneco dell'Etna Modica (RG) Italy Swedish University of Agricultural Sciences Grimsö Wildlife Research Station Department of Ecology Riddarhyttan Sweden Department of Zoology Institute of Ecology and Earth Sciences University of Tartu Tartu Estonia Charles University Department of Zoology Faculty of Science Prague 2 Czech Republic Faculty of Tropical AgriSciences Czech University of Life Sciences Prague Czech Republic Center for Wildlife Genetics Senckenberg Research Institute and Natural History Museum Frankfurt Gelnhausen Germany CIBIO/InBIO University of Porto Vairão Portugal BIOPOLIS Program in Genomics Biodiversity and Land Planning CIBIO Vairão Portugal Konrad Lorenz Institute of Ethology University of Veterinary Medicine Vienna Austria Faculty of Forestry Technical University Zvolen Slovakia Department of Ecology Institute of Functional Biology and Ecology Faculty of Biology University of Warsaw Biological and Chemical Research Centre Warszawa Poland Department of Biological Chemical and Pharmaceutical Sciences and Technology (STEBICEF) University of Palermo Palermo Italy Museum of Zoology “P. Doderlein” SIMUA University of Palermo Palermo Italy Università di Roma La Sapienza Department Biology and Biotechnologies “Charles Darwin” Roma Italy NTNU University Museum

The Sicilian wolf remained isolated in Sicily from the end of the Pleistocene until its extermination in the 1930s–1960s. Given its long-term isolation on the island and distinctive morphology, the genetic origin of the Sicilian wolf remains debated. We sequenced four nuclear genomes and five mitogenomes from the seven existing museum specimens to investigate the Sicilian wolf ancestry, relationships with extant and extinct wolves and dogs, and diversity. Our results show that the Sicilian wolf is most closely related to the Italian wolf but carries ancestry from a lineage related to European Eneolithic and Bronze Age dogs. The average nucleotide diversity of the Sicilian wolf was half of the Italian wolf, with 37–50% of its genome contained in runs of homozygosity. Overall, we show that, by the time it went extinct, the Sicilian wolf had high inbreeding and low-genetic diversity, consistent with a population in an insular environment. © 2023 The Authors

关键词： Canine genetics evolutionary biology

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Natural variation in the parameters of innate immune cells is preferentially driven by genetic factors (vol 19, pg 302, 2018)

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NATURE IMMUNOLOGY 2018年第6期19卷 645-645页

作者： Patin, Etienne Hasan, Milena Bergstedt, Jacob Rouilly, Vincent Libri, Valentina Urrutia, Alejandra Alanio, Cecile Scepanovic, Petar Hammer, Christian Joensson, Friederike Beitz, Benoit Quach, Helene Lim, Yoong Wearn Hunkapiller, Julie Zepeda, Magge Green, Cherie Piasecka, Barbara Leloup, Claire Rogge, Lars Huetz, Francois Peguillet, Isabelle Lantz, Olivier Fontes, Magnus Di Santo, James P. Thomas, Stephanie Fellay, Jacques Duffy, Darragh Quintana-Murci, Lluis Albert, Matthew L. Unit of Human Evolutionary Genetics Department of Genomes & Genetics Institut Pasteur Paris France CNRS UMR 2000 Paris France Center of Bioinformatics Biostatistics and Integrative Biology Institut Pasteur Paris France Center for Translation Research Institut Pasteur Paris France Department of Automatic Control Lund University Lund Sweden International Group for Data Analysis Institut Pasteur Paris France Laboratory of Dendritic Cell Immunobiology Department of Immunology Institut Pasteur Paris France INSERM U1223 Paris France Department of Cancer Immunology Genentech South San Francisco CA USA School of Life Sciences École Polytechnique Fédérale de Lausanne Lausanne Switzerland Swiss Institute of Bioinformatics Lausanne Switzerland Antibodies in Therapy and Pathology Department of Immunology Institut Pasteur Paris France INSERM U760 Paris France Department of Human Genetics Genentech South San Francisco CA USA Employee Donation Program Genentech South San Francisco CA USA Department of Development Sciences Genentech South San Francisco CA USA Immunoregulation Unit Department of Immunology Institut Pasteur Paris France INSERM U783 Faculté de Médecine Site Necker-Enfants Malades Université Paris Descartes Paris France Lymphocyte Population Biology CNRS URA 1961 Institut Pasteur Paris France Center of Clinical Investigations CIC-BT1428 IGR/Curie Paris France Department of Biopathology Institut Curie Paris France Equipe Labellisée de la Ligue de Lutte Contre le Cancer Institut Curie Paris France INSERM/Institut Curie U932 Paris France Centre for Mathematical Sciences Lund University Lund Sweden Innate Immunity Unit Institut Pasteur Paris France St. Giles Laboratory of Human Genetics of Infectious Diseases Rockefeller Branch Rockefeller University New York NY USA Laboratory of Human Genetics of Infectious Diseases Necker Branch INSERM U1163 Necker Hospital for Sick Children Paris France Paris Descartes University Imagine Insti

The quantification and characterization of circulating immune cells provide key indicators of human health and disease. To identify the relative effects of environmental and genetic factors on variation in the parameters of innate and adaptive immune cells in homeostatic conditions, we combined standardized flow cytometry of blood leukocytes and genome-wide DNA genotyping of 1,000 healthy, unrelated people of Western European ancestry. We found that smoking, together with age, sex and latent infection with cytomegalovirus, were the main non-genetic factors that affected variation in parameters of human immune cells. Genome-wide association studies of 166 immunophenotypes identified 15 loci that showed enrichment for disease-associated variants. Finally, we demonstrated that the parameters of innate cells were more strongly controlled by genetic variation than were those of adaptive cells, which were driven by mainly environmental exposure. Our data establish a resource that will generate new hypotheses in immunology and highlight the role of innate immunity in susceptibility to common autoimmune diseases.

关键词： Activated Lymphocyte Genetic factors Immunity Nonspecific Immune Cell Variation

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Patterns of somatic structural variation in human cancer genomes (vol 578, pg 112, 2020)

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NATURE 2023年第7948期614卷 E38-E38页

作者： Li, Yilong Roberts, Nicola D. Wala, Jeremiah A. Shapira, Ofer Schumacher, Steven E. Kumar, Kiran Khurana, Ekta Waszak, Sebastian Korbel, Jan O. Haber, James E. Imielinski, Marcin Weischenfeldt, Joachim Beroukhim, Rameen Campbell, Peter J. Cancer Genome Project Wellcome Trust Sanger Institute Hinxton UK Totient Inc Cambridge MA USA Wellcome Sanger Institute Wellcome Genome Campus Hinxton UK Department of Haematology University of Cambridge Cambridge UK Cambridge University Hospitals NHS Foundation Trust Cambridge UK Korea Advanced Institute of Science and Technology Daejeon South Korea Department of Zoology Genetics and Physical Anthropology University of Santiago de Compostela Santiago de Compostela Spain Centre for Research in Molecular Medicine and Chronic Diseases (CIMUS) University of Santiago de Compostela Santiago de Compostela Spain The Biomedical Research Centre (CINBIO) University of Vigo Vigo Spain Centre for Research in Molecular Medicine and Chronic Diseases (CiMUS) Universidade de Santiago de Compostela Santiago de Compostela Spain Department of Zoology Genetics and Physical Anthropology (CiMUS) Universidade de Santiago de Compostela Santiago de Compostela Spain The Biomedical Research Centre (CINBIO) Universidade de Vigo Vigo Spain The Broad Institute of Harvard and MIT Cambridge MA USA Bioinformatics and Integrative Genomics Harvard University Cambridge MA USA Department of Cancer Biology Dana-Farber Cancer Institute Boston MA USA Broad Institute of MIT and Harvard Cambridge MA USA Department of Medical Oncology Dana-Farber Cancer Institute Boston MA USA Harvard Medical School Boston MA USA Massachusetts General Hospital Center for Cancer Research Charlestown MA USA Dana-Farber Cancer Institute Boston MA USA Department of Biostatistics and Computational Biology Dana-Farber Cancer Institute and Harvard Medical School Boston MA USA Weill Cornell Medical College New York NY USA Department of Physiology and Biophysics Weill Cornell Medicine New York NY USA Institute for Computational Biomedicine Weill Cornell Medicine New York NY USA Controlled Department and Institution New York NY USA Englander Institute for Precision Medicine Weill Cornell Medicine Ne

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Effect of climate on traits of dominant and rare tree species in the world's forests

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Nature communications 2025年第1期16卷 4773页

作者： Iris Hordijk Lourens Poorter Jingjing Liang Peter B Reich Sergio de-Miguel Gert-Jan Nabuurs Javier G P Gamarra Han Y H Chen Mo Zhou Susan K Wiser Hans Pretzsch Alain Paquette Nicolas Picard Bruno Hérault Jean-Francois Bastin Giorgio Alberti Meinrad Abegg Yves C Adou Yao Angelica M Almeyda Zambrano Braulio V Alvarado Esteban Alvarez-Davila Patricia Alvarez-Loayza Luciana F Alves Iêda Amaral Christian Ammer Clara Antón-Fernández Alejandro Araujo-Murakami Luzmila Arroyo Valerio Avitabile Gerardo A Aymard C Timothy Baker Olaf Banki Jorcely Barroso Meredith L Bastian Luca Birigazzi Philippe Birnbaum Robert Bitariho Pascal Boeckx Frans Bongers Olivier Bouriaud Pedro H S Brancalion Susanne Brandl Francis Q Brearley Roel Brienen Eben N Broadbent Helge Bruelheide Roberto Cazzolla Gatti Ricardo G Cesar Goran Cesljar Robin L Chazdon Chelsea Chisholm Emil Cienciala Connie J Clark David B Clark Gabriel Colletta David Coomes Fernando Cornejo Valverde Jose J Corral-Rivas Philip Crim Jonathan Cumming Selvadurai Dayanandan André L de Gasper Mathieu Decuyper Géraldine Derroire Ben DeVries Ilija Djordjevic Aurélie Dourdain Jiri Dolezal Nestor Laurier Engone Obiang Brian Enquist Teresa Eyre Adandé Belarmain Fandohan Tom M Fayle Leandro V Ferreira Ted R Feldpausch Leena Finér Markus Fischer Christine Fletcher Lorenzo Frizzera Damiano Gianelle Henry B Glick David Harris Andrew Hector Andreas Hemp John Herbohn Annika Hillers Eurídice N Honorio Coronado Cang Hui Hyunkook Cho Thomas Ibanez Ilbin Jung Nobuo Imai Andrzej M Jagodzinski Bogdan Jaroszewicz Vivian Johannsen Carlos A Joly Tommaso Jucker Viktor Karminov Kuswata Kartawinata Elizabeth Kearsley David Kenfack Deborah Kennard Sebastian Kepfer-Rojas Gunnar Keppel Mohammed Latif Khan Timothy Killeen Hyun Seok Kim Kanehiro Kitayama Michael Köhl Henn Korjus Florian Kraxner Diana Laarmann Mait Lang Simon Lewis Huicui Lu Natalia Lukina Brian Maitner Yadvinder Malhi Eric Marcon Beatriz Schwantes Marimon Ben Hur Marimon-Junior Andrew Robert Marshall Emanuel Martin Olga Martynenko Jorge A Mea Institute of Integrative Biology ETH Zurich (Swiss Federal Institute of Technology) Zurich Switzerland. irishordijk@***. Wageningen University and Research Wageningen The Netherlands. irishordijk@***. Wageningen University and Research Wageningen The Netherlands. Department of Forestry and Natural Resources Purdue University West Lafayette IN USA. Department of Forest Resources University of Minnesota St Paul MN USA. Hawkesbury Institute for the Environment Western Sydney University Penrith NSW Australia. Department of Agricultural and Forest Sciences and Engineering University of Lleida Lleida Spain. Forest Science and Technology Centre of Catalonia (CTFC) Solsona Spain. Forestry Division Food and Agriculture Organization of the United Nations Rome Italy. Faculty of Natural Resources Management Lakehead University Thunder Bay ON Canada. Manaaki Whenua-Landcare Research Lincoln New Zealand. Chair for Forest Growth and Yield Science TUM School for Life Sciences Technical University of Munich Munich Germany. Centre for Forest Research Université du Québec à Montréal Montréal QC Canada. GIP ECOFOR Paris France. CIRAD Forêts et Sociétés Montpellier France. Forêts et Sociétés Univ Montpellier CIRAD Montpellier France. Gembloux Agro Bio-Tech University of Liege Liege Belgium. Faculty of Science and Technology Free University of Bolzano Bolzano Italy. Department of Agricultural Food Environmental and Animal Sciences University of Udine Udine Italy. Swiss Federal Institute for Forest Snow and Landscape Research WSL Birmensdorf Switzerland. UFR Biosciences University Félix Houphouët-Boigny Abidjan Côte d'Ivoire. Spatial Ecology and Conservation Laboratory Center for Latin American Studies University of Florida Gainesville FL USA. Forestry School Tecnológico de Costa Rica TEC Cartago Costa Rica. Fundacion ConVida Universidad Nacional Abierta y a Distancia UNAD Medellin Colombia. Field Museum of Natural History Chicago IL USA. Center for Trop

Species' traits and environmental conditions determine the abundance of tree species across the globe. The extent to which traits of dominant and rare tree species differ remains untested across a broad environmental range, limiting our understanding of how species traits and the environment shape forest functional composition. We use a global dataset of tree composition of >22,000 forest plots and 11 traits of 1663 tree species to ask how locally dominant and rare species differ in their trait values, and how these differences are driven by climatic gradients in temperature and water availability in forest biomes across the globe. We find three consistent trait differences between locally dominant and rare species across all biomes; dominant species are taller, have softer wood and higher loading on the multivariate stem strategy axis (related to narrow tracheids and thick bark). The difference between traits of dominant and rare species is more strongly driven by temperature compared to water availability, as temperature might affect a larger number of traits. Therefore, climate change driven global temperature rise may have a strong effect on trait differences between dominant and rare tree species and may lead to changes in species abundances and therefore strong community reassembly.

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The repertoire of mutational signatures in human cancer (vol 578, pg 94, 2020)

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NATURE 2023年第7948期614卷 E41-E41页

作者： Alexandrov, Ludmil B. Kim, Jaegil Haradhvala, Nicholas J. Huang, Mi Ni Ng, Alvin Wei Tian Wu, Yang Boot, Arnoud Covington, Kyle R. Gordenin, Dmitry A. Bergstrom, Erik N. Islam, S. M. Ashiqul Lopez-Bigas, Nuria Klimczak, Leszek J. McPherson, John R. Morganella, Sandro Sabarinathan, Radhakrishnan Wheeler, David A. Mustonen, Ville Getz, Gad Rozen, Steven G. Stratton, Michael R. Department of Cellular and Molecular Medicine Department of Bioengineering Moores Cancer Center University of California San Diego CA USA Wellcome Sanger Institute Wellcome Genome Campus Hinxton UK Department of Cellular and Molecular Medicine and Department of Bioengineering University of California San Diego La Jolla CA USA UC San Diego Moores Cancer Center San Diego CA USA University of California San Diego San Diego CA USA Broad Institute of MIT and Harvard Cambridge MA USA Center for Cancer Research Massachusetts General Hospital Boston MA USA Massachusetts General Hospital Boston MA USA Department of Pathology Massachusetts General Hospital Boston MA USA Harvard Medical School Boston MA USA Laboratory for Medical Science Mathematics RIKEN Center for Integrative Medical Sciences Yokohama Japan Computational Biology Program Ontario Institute for Cancer Research Toronto ON Canada Programme in Cancer & Stem Cell Biology Duke-NUS Medical School Singapore Singapore Centre for Computational Biology Duke-NUS Medical School Singapore Singapore Programme in Cancer and Stem Cell Biology Duke-NUS Medical School Singapore Singapore Programme in Cancer and Stem Cell Biology Centre for Computational Biology Duke-NUS Medical School Singapore Singapore SingHealth Duke-NUS Institute of Precision Medicine National Heart Centre Singapore Singapore Singapore Cancer Science Institute of Singapore National University of Singapore Singapore Singapore Institute of Molecular and Cell Biology Singapore Singapore Laboratory of Cancer Epigenome Division of Medical Science National Cancer Centre Singapore Singapore Singapore Duke-NUS Medical School Singapore Singapore Human Genome Sequencing Center Baylor College of Medicine Houston TX USA Dan L. Duncan Cancer Center Baylor College of Medicine Houston TX USA Department of Molecular and Human Genetics Baylor College of Medicine Houston TX USA Genome Integrity and Structural Biology Laboratory National Ins

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