The distributed identification of network systems under local observation has recently become one of the research hot spots. Due to the unobservable influence of other subsystems and the noise, it is difficult for loc...
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The scattering media measurement for structured light techniques remains challenging due to the subsurface scattering that destroys fringe patterns and introduces phase error. Recently, deep learning has been successf...
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This paper solves the event-triggered robust consensus problem of disturbed multi-agent systems (MASs) in fully distributed fashion. First, a distributed extended state observer (DESO) is developed for appropriately e...
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Agriculture crop classification is helpful for agricultural production. However, it is challenging to classify crops from the agriculture image suffering from these problems: 1) Crops are often masked in complex backg...
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Due to factors such as relative motion between the imaging device and the target object or out-of-focus optical system, some images may become blurred, severely affecting subsequent image processing tasks. We propose ...
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Policy gradient methods are one of the most successful methods for solving challenging reinforcement learning problems. However, despite their empirical successes, many SOTA policy gradient algorithms for discounted p...
Insufficient inertia has retrained the progress toward a one hundred percent inverter-based power generation. To solve this issue, a promising way is to exploit synthetic inertia based on the power electronic inverter...
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Recently, remarkable progress has been achieved in single image super-resolution using methods based on CNN and Transformer architectures. However, existing approaches often construct a substantial number of netw...
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A growing body of research indicates that employing large models for adaptation to downstream tasks often yields remarkable performance. However, in the domain of ship detection, the potential of these large models is...
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Protein-Protein Interaction (PPI) provides important insights into the metabolic mechanisms of different biological processes. Although PPIs in some organisms have been investigated systematically, PPIs in the ocean a...
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ISBN:
(纸本)9798400712203
Protein-Protein Interaction (PPI) provides important insights into the metabolic mechanisms of different biological processes. Although PPIs in some organisms have been investigated systematically, PPIs in the ocean archaea remain largely unexplored. But such species have special investigation value since their adaptation to extreme living conditions may generate unique PPIs. In this paper, we aim to characterize and predict PPIs in ocean archaea to advance understanding of their metabolic networks. First, we collect all ocean archaea PPIs with high confidence from STRING database and analyze the PPI network features, including centrality and enrichment analysis. The functional enrichment results of the largest connecting subgraph in the PPI network show most PPIs in our constructed dataset is related to the translation and transcription processes. Then, we generate an equal number of negative PPI pairs, whose members have either different subcellular locations or GO terms. We also use the generated dataset to test the performance of three pretraining methods and their ensemble methods in the binary PPI prediction task. Our results suggest the ensemble methods could be applied to further improve models’ performance. Fine-tuned models trained on the ocean archaea dataset are expected to predict the other ocean archaea PPIs that are not included in the STRING database and get more understanding about the ocean archaea PPI universe.
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